He was the primary cause of the disputes between the Massachusetts Bay Colony and the Parent Government, and the unrelenting persecutor of all who differed from him in religious worship.

He was hostile to monarchy and all English authority from the beginning; he got and kept the elective franchise, and eligibility to office, in the hands of the Congregationalists alone, and became of course their idol.
The King's suggesting the election of a Governor other than Endicot was a refutation of their statements that he intended to deprive them of their local self-government.

The following is Neal's notice of the death of Mr.Endicot: "On the 23rd of March, 1665, died Mr.John Endicot, Governor of the Jurisdiction of Massachusetts.

He arrived at Salem in the year 1628, and had the chief command of those that first settled there, and shared with them in all their hardships.

He continued at Salem till the magistrates desired him to remove to Boston for the more convenient administration of justice, as Governor of the Jurisdiction, to which he was frequently elected for many years together.